Get equivalent Rt values

Get equivalent Rt values

get_rt(obj, lag = 30, forecast_days = 0, iter = seq_along(obj$post$R0))

Arguments

obj	Output from fit_seir().
lag	Time lag for the inputs for Rt.
forecast_days	Number of projection days.
iter	MCMC iterations to include. Defaults to all.

Value

A data frame of state values with a column of Rt values. Number of rows is 1 per time step. An NA for Rt where insufficient lagged data are available.

Details

See project_seir() for an example.